I've worked on a lot of old cars with road draft tubes. Even on a car engine, which does not have the extreme pressure fluctuations of a 360 degree twin (basically a 250cc single) they don't work very well. The oil gets dirty very fast, and sludge builds up quickly. You need to change the oil about once every thousand miles on those old cars, and the engines rarely ever reach 100,000 miles. The PVC valve was a huge improvement in crankcase ventilation. Since it was originally designed as an emissions control device, my initial reaction 40 years ago was to get rid of it, since I am not a fan of government mandated devices on motor vehicles. But I quickly discovered just how efficient it was at venting the crankcase, probably 10 times better than to old road draft tube. I still don't know why motorcycles don't use them, they just connect the crankcase breather to the airbox, which does trap liquids and keep dirt out. But it has nowhere near the vacuum of a hose connected directly to the intake manifold.
On a car with a PVC system, you can actually hold your hand over the oil filler, and feel the vacuum. The crankcase is under negative pressure most of the time, which works wonders as far as keeping it clean, which drastically increases engine life. The stock filter is also far more efficient at stopping dirt than those pod filters. If you are going to run that pod, I would at least suggest putting a filter on the crankcase vent hose. The filter also flows more air as well as dirt, so you will need bigger jets. I personally don't understand why people use these things. I have always kept the stock air filter assembly completely intact on all my bikes.
I also noticed you whacked off most of your exhaust system. That seriously reduces backpressure, and the engine was designed to run with a certain amount of backpressure. Between the pod filter and the cut up exhaust, you actually may be beyond the tuning range of the carb, making it impossible to get a proper air/fuel mixture at all engine rpms. The engineers designed it the way they did for a reason. Unless you are an engineer, and understand what your changes will do, other than look or sound different, it is better to leave it alone.